https://bioinfomed.fr/ 2026-11-04T17:36:48+00:00 https://bioinfomed.fr/ https://bioinfomed.fr/lib/exe/fetch.php?media=wiki:dokuwiki.svg text/html 2026-10-27T10:28:57+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?image=teachings%3Aintro_metag.pdf&ns=teachings&rev=1793096937&tab_details=history&media_do=diff&do=media <img src="https://bioinfomed.fr/lib/images/fileicons/svg/pdf.svg" alt="intro_metag.pdf" loading="lazy" width="500" height="500" /> text/html 2026-10-23T20:06:33+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?id=teachings:teachings_bim&rev=1792785993&do=diff Master of Life and Health Sciences - Sciences faculty M1 & M2 - BBC (Bioinformatique et Biologie Computationnelle) + others UE Omiques, UE Atelier Omiques Objectives of teachings Basis in Metagenomics and Barcoding. Genomes assembling Prerequisites text/html 2026-10-22T13:21:51+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?id=teachings:ngs_assemblies&rev=1792675311&do=diff Tutorial: NGS assemblies Aims This tutorial will address several assembly issues: quality control, assembly, mapping and scaffolding. The assembly can be done with Velvet or Minia. Requirement * You need to use a virtual machine (VM). This VM is downloadable text/html 2026-09-23T08:18:40+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?id=teachings:teachings_isem&rev=1790151520&do=diff Master EADE - Introduction to Python Objectives of Teachings This 18-hour module provides an introduction to the Python programming language. Python is a modern, powerful and very accessible programming language for non-specialists. Today, it is used in many fields, both in the research world or in companies. It is a language that goes to the essential, minimizing technical constraints which makes it an ideal language to learn programming. It can help to solve a problem in a few lines of code… text/html 2026-06-30T07:22:53+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?id=contacts:croce:full_cv&rev=1782804173&do=diff Olivier Croce, PhD "CNRS Research Engineer, Senior Class (IRHC) Head of the Bioinformatics & IT Service IRCAN — Institute for Research on Cancer and Aging of Nice INSERM U1081 · CNRS UMR 7284 · Université Côte d’Azur" olivier.croce@cnrs.fr olivier.croce@univ-cotedazur.fr bioinfomed.fr bioinfo.ircan.org ORCID Profile text/html 2026-06-30T07:20:52+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?id=contacts:croce:croce2&rev=1782804052&do=diff Olivier Croce, PhD "CNRS Research Engineer, Senior Class (IRHC) Head of the Bioinformatics & IT Service IRCAN — Institute for Research on Cancer and Aging of Nice INSERM U1081 · CNRS UMR 7284 · Université Côte d’Azur" olivier.croce@cnrs.fr olivier.croce@univ-cotedazur.fr bioinfomed.fr bioinfo.ircan.org ORCID Profile text/html 2026-06-30T07:19:00+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?id=contacts:croce:publications&rev=1782803940&do=diff Publications (in peer-reviewed journals) ORCID: 0000-0002-7342-3157 * [69] 2026 ; Kellermann G, Croce O, Mograbi B, Hofman P, Brest P. Comprehensive mapping of identical sequences across human proteins emphasizes the widespread issue of shared epitopes in self-antigens. // NAR Genom Bioinform.// text/html 2026-03-02T09:40:03+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?image=teachings%3Apython_en.pdf&ns=teachings&rev=1772444403&tab_details=history&media_do=diff&do=media <img src="https://bioinfomed.fr/lib/images/fileicons/svg/pdf.svg" alt="python_en.pdf" loading="lazy" width="500" height="500" /> text/html 2026-01-22T11:01:00+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?image=teachings%3Angs_and_genomes_assemblies.pdf&ns=teachings&rev=1769079660&tab_details=history&media_do=diff&do=media <img src="https://bioinfomed.fr/lib/images/fileicons/svg/pdf.svg" alt="ngs_and_genomes_assemblies.pdf" loading="lazy" width="500" height="500" /> text/html 2025-10-27T17:03:40+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?image=teachings%3Anihms-2063750.pdf&ns=teachings&rev=1761584620&tab_details=history&media_do=diff&do=media <img src="https://bioinfomed.fr/lib/images/fileicons/svg/pdf.svg" alt="nihms-2063750.pdf" loading="lazy" width="500" height="500" /> text/html 2023-11-06T15:27:19+00:00 olivier (olivier@undisclosed.example.com) https://bioinfomed.fr/doku.php?image=teachings%3Afmicb-07-00459.pdf&ns=teachings&rev=1699284439&tab_details=history&media_do=diff&do=media <img src="https://bioinfomed.fr/lib/images/fileicons/svg/pdf.svg" alt="fmicb-07-00459.pdf" loading="lazy" width="500" height="500" />